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  5. Len_g56643

Len_g56643


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g56643

Target Alias Description ECC score Gene Family Method Actions
AT3G47550 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g055014 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g074839 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g090033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51424 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G021200.1 Ceric.23G021200 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01008001001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Lfl_g08250 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01567 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014915_P002 Zm00001e014915 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 149 265
IPR011016 Znf_RING-CH 97 142
No external refs found!