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  5. Len_g56379

Len_g56379


Description : not classified & original description: none


Gene families : OG0001839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g56379
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Als_g02452 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032764001 No alias Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species
LOC_Os01g10930.1 LOC_Os01g10930 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11010.1 LOC_Os01g11010 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species
MA_10226858g0010 No alias Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species
Mp8g09340.1 No alias Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species
Pir_g22518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g062460.4.1 Solyc07g062460 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.03 OrthoFinder output from all 47 species
Solyc10g007330.1.1 Solyc10g007330 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species
Solyc12g014270.3.1 Solyc12g014270 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.03 OrthoFinder output from all 47 species
Spa_g35644 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g39177 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14834 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e012654_P001 Zm00001e012654 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR021102 PNGase_A 238 652
No external refs found!