Smo230858 (PACid_15416947)


Aliases : PACid_15416947

Description : 16.2 secondary metabolism.phenylpropanoids Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. pinoresinol reductase 1 (PRR1) CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030) BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1) Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27 Bacteria - 779 Metazoa - 2 Fungi - 496 Plants - 600 Viruses - 0 Other Eukaryotes - 181 (source: NCBI BLink). & (p52579|ifrh_tobac : 256.0


Gene families : OG_01_0000093 (Gene family) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo230858
Cluster HCCA cluster: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G75290 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Gene family
AT1G75300 No alias NmrA-like negative transcriptional regulator family protein 0.02 Gene family
GSVIVT01009731001 No alias No description available 0.02 Gene family
GSVIVT01025819001 No alias 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.02 Gene family
GSVIVT01025822001 No alias 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.02 Gene family
GSVIVT01029357001 No alias 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.02 Gene family
GSVIVT01037073001 No alias No description available 0.03 Gene family
GSVIVT01037077001 No alias No description available 0.02 Gene family
LOC_Os01g01650 Os01g0106300 No description available 0.03 Gene family
LOC_Os01g13610 Os01g0237500,... 16.8.5.1 secondary... 0.02 Gene family
LOC_Os06g27770 Os06g0472200 16.8.5.1 secondary... 0.04 Gene family
LOC_Os06g28550 Os06g0479400 16.8.5.1 secondary... 0.01 Gene family
MA_365984g0010 No alias No description available 0.03 Gene family
MA_73179g0010 No alias 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.02 Gene family
Solyc10g052490.2.1 Solyc10g052490.2 16.8.5.1 secondary... 0.02 Gene family
Zm00001d034357 GRMZM2G004036 16.8.5.1 secondary... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008030 NmrA-like 9 267
No external refs found!