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  5. Len_g56185

Len_g56185 (TTN3, ATSMC4, SMC2, ATCAP-E1)


Aliases : TTN3, ATSMC4, SMC2, ATCAP-E1

Description : not classified & original description: none


Gene families : OG0005512 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g56185

Target Alias Description ECC score Gene Family Method Actions
AT3G47460 ATSMC2 Structural maintenance of chromosomes (SMC) family protein 0.02 OrthoFinder output from all 47 species
AT5G62410 TTN3, ATSMC4,... structural maintenance of chromosomes 2 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 31 72
No external refs found!