Smo230724 (PACid_15416135)


Aliases : PACid_15416135

Description : 21.1 redox.thioredoxin chloroplast localized thioredoxin, similar to prokaryotic types. ATHM2 CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766) BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1) Has 9201 Blast hits to 9185 proteins in 2237 species: Archae - 146 Bacteria - 6732 Metazoa - 24 Fungi - 110 Plants - 264 Viruses - 0 Other Eukaryotes - 1925 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0000568 (Gene family) Phylogenetic Tree(s): OG0000568_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo230724
Cluster HCCA cluster: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.04 Gene family
AT1G50320 THX, ATHX, ATX thioredoxin X 0.04 Gene family
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.02 Gene family
MA_474303g0010 No alias 21.1 redox.thioredoxin chloroplast localized... 0.01 Gene family
Solyc10g006970.3.1 Solyc10g006970.3 21.1 redox.thioredoxin encodes a chloroplast thioredoxin... 0.02 Gene family
Solyc12g013810.2.1 Solyc12g013810.2 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.03 Gene family
Zm00001d001843 GRMZM2G436199 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.02 Gene family
Zm00001d023707 GRMZM2G181258 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.02 Gene family
Zm00001d051250 GRMZM2G070343 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 6 104
No external refs found!