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  5. Len_g55934

Len_g55934


Description : not classified & original description: none


Gene families : OG0004557 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004557_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g55934
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00054810 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00080p00083910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G37070 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT5G60150 No alias unknown protein; Has 1807 Blast hits to 1807 proteins in... 0.07 OrthoFinder output from all 47 species
Als_g12841 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g51318 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04641 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene01997.t1 Aspi01Gene01997 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55728.t1 Aspi01Gene55728 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G025400.1 Ceric.05G025400 not classified & original description: pacid=50579034... 0.09 OrthoFinder output from all 47 species
Dcu_g36728 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01025625001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_32323 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g01220.1 LOC_Os12g01220 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g12302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g24923 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10431982g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g18500.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g20091 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06780 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g29925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011770 No alias not classified & original description: CDS=1-2226 0.04 OrthoFinder output from all 47 species
Sam_g27994 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc06g075420.1.1 Solyc06g075420 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Tin_g08123 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010462_P002 Zm00001e010462 MT plus-end-tracking protein (GPT) 0.03 OrthoFinder output from all 47 species
Zm00001e015070_P001 Zm00001e015070 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!