AT4G34470 (SK12, ASK12)


Aliases : SK12, ASK12

Description : SKP1-like 12


Gene families : OG_01_0000418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000418_tree ,
OG_02_0000338 (LandPlants) Phylogenetic Tree(s): OG_02_0000338_tree ,
OG_03_0000762 (SeedPlants) Phylogenetic Tree(s): OG_03_0000762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34470
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT2G03170 ASK14, SK14 SKP1-like 14 0.13 Archaeplastida
AT2G03190 ASK16, SK16 SKP1-like 16 0.05 Archaeplastida
AT2G20160 MEO, ASK17 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.05 Archaeplastida
AT2G25700 ASK3, SK3 SKP1-like 3 0.06 Archaeplastida
AT3G21830 SK8, ASK8 SKP1-like 8 0.06 Archaeplastida
AT3G21840 ASK7, SK7 SKP1-like 7 0.04 Archaeplastida
AT3G21860 ASK10, SK10 SKP1-like 10 0.06 Archaeplastida
LOC_Os07g05150.1 No alias target protein binding component SKP1/ASK1 of... 0.11 Archaeplastida
LOC_Os07g05160.1 No alias target protein binding component SKP1/ASK1 of... 0.07 Archaeplastida
LOC_Os07g05180.1 No alias target protein binding component SKP1/ASK1 of... 0.11 Archaeplastida
LOC_Os08g28800.1 No alias target protein binding component SKP1/ASK1 of... 0.04 Archaeplastida
LOC_Os08g28820.1 No alias target protein binding component SKP1/ASK1 of... 0.11 Archaeplastida
LOC_Os09g10270.1 No alias target protein binding component SKP1/ASK1 of... 0.05 Archaeplastida
MA_121410g0010 No alias target protein binding component SKP1/ASK1 of... 0.02 Archaeplastida
MA_99195g0010 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Smo98727 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Zm00001e011287_P001 No alias target protein binding component SKP1/ASK1 of... 0.02 Archaeplastida
Zm00001e011288_P001 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Zm00001e020534_P002 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Zm00001e042493_P001 No alias target protein binding component SKP1/ASK1 of... 0.02 Archaeplastida
AT2G03170 ASK14, SK14 SKP1-like 14 0.12 LandPlants
AT2G03190 ASK16, SK16 SKP1-like 16 0.04 LandPlants
AT2G20160 MEO, ASK17 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.05 LandPlants
AT2G25700 ASK3, SK3 SKP1-like 3 0.04 LandPlants
LOC_Os07g05150.1 No alias target protein binding component SKP1/ASK1 of... 0.08 LandPlants
LOC_Os07g05160.1 No alias target protein binding component SKP1/ASK1 of... 0.06 LandPlants
LOC_Os07g05180.1 No alias target protein binding component SKP1/ASK1 of... 0.08 LandPlants
LOC_Os08g28800.1 No alias target protein binding component SKP1/ASK1 of... 0.04 LandPlants
LOC_Os08g28820.1 No alias target protein binding component SKP1/ASK1 of... 0.09 LandPlants
LOC_Os09g10270.1 No alias target protein binding component SKP1/ASK1 of... 0.04 LandPlants
MA_99195g0010 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
Smo98727 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Zm00001e011287_P001 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
Zm00001e011288_P001 No alias target protein binding component SKP1/ASK1 of... 0.03 LandPlants
Zm00001e020534_P002 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
Zm00001e042493_P001 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
AT2G25700 ASK3, SK3 SKP1-like 3 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 103 150
IPR016073 Skp1_comp_POZ 4 64
No external refs found!