Len_g55830

Description : beta-1,3-galactosyltransferase *(B3GALT) & original description: none

Gene families : OG0000384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g55830
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00099p00123290	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.hydroxyproline-rich...	0.06	OrthoFinder output from all 47 species
AT1G22015	DD46	Galactosyltransferase family protein	0.02	OrthoFinder output from all 47 species
AT1G33430	No alias	Galactosyltransferase family protein	0.06	OrthoFinder output from all 47 species
AT2G32430	No alias	Galactosyltransferase family protein	0.02	OrthoFinder output from all 47 species
Als_g51745	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Aob_g42303	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Aop_g68618	DD46	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g70197	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.05	OrthoFinder output from all 47 species
Ceric.21G018200.1	Ceric.21G018200	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.05	OrthoFinder output from all 47 species
Dcu_g44108	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.05	OrthoFinder output from all 47 species
Dcu_g44964	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g40247	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.1	OrthoFinder output from all 47 species
GSVIVT01030428001	No alias	Cell wall.cell wall proteins.hydroxyproline-rich...	0.01	OrthoFinder output from all 47 species
GSVIVT01037121001	No alias	Cell wall.cell wall proteins.hydroxyproline-rich...	0.03	OrthoFinder output from all 47 species
LOC_Os01g65590.1	LOC_Os01g65590	AGP beta-1,3-galactosyltransferase	0.02	OrthoFinder output from all 47 species
LOC_Os05g35266.1	LOC_Os05g35266	AGP beta-1,3-galactosyltransferase	0.04	OrthoFinder output from all 47 species
Msp_g02061	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g15577	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.09	OrthoFinder output from all 47 species
Solyc07g064670.3.1	Solyc07g064670	AGP beta-1,3-galactosyltransferase	0.04	OrthoFinder output from all 47 species
Solyc11g042810.2.1	Solyc11g042810	AGP beta-1,3-galactosyltransferase	0.05	OrthoFinder output from all 47 species
Spa_g36496	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Spa_g46195	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.13	OrthoFinder output from all 47 species
Tin_g45996	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.12	OrthoFinder output from all 47 species
Zm00001e012498_P003	Zm00001e012498	AGP beta-1,3-galactosyltransferase	0.03	OrthoFinder output from all 47 species
Zm00001e028632_P001	Zm00001e028632	AGP beta-1,3-galactosyltransferase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035434	copper ion transmembrane transport	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002659	Glyco_trans_31	147	343
IPR025298	DUF4094	10	108

External Links

No external refs found!

Len_g55830

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation