Smo230422 (PACid_15413907)


Aliases : PACid_15413907

Description : 16.7 secondary metabolism.wax Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined. ECERIFERUM 1 (CER1) FUNCTIONS IN: aldehyde decarbonylase activity INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development LOCATED IN: endoplasmic reticulum EXPRESSED IN: 18 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940) BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1). (original description: no original description)'


Gene families : OG_01_0000286 (Gene family) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo230422
Cluster HCCA cluster: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G02190 No alias Fatty acid hydroxylase superfamily 0.02 Gene family
AT1G02205 CER1 Fatty acid hydroxylase superfamily 0.04 Gene family
AT5G57800 CER3, WAX2, YRE, FLP1 Fatty acid hydroxylase superfamily 0.02 Gene family
GSVIVT01016071001 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.02 Gene family
GSVIVT01023740001 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.03 Gene family
LOC_Os02g08230 Os02g0178800 16.7 secondary metabolism.wax encodes a transmembrane... 0.02 Gene family
LOC_Os06g44300 Os06g0653000 16.7 secondary metabolism.wax encodes a transmembrane... 0.02 Gene family
LOC_Os09g25850 Os09g0426800 16.7 secondary metabolism.wax encodes a transmembrane... 0.02 Gene family
MA_10435047g0010 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.02 Gene family
MA_10435069g0020 No alias 16.7 secondary metabolism.wax Expression of the CER1... 0.02 Gene family
MA_1050556g0010 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.03 Gene family
MA_107531g0010 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.02 Gene family
MA_112209g0010 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.03 Gene family
MA_19405g0010 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.02 Gene family
MA_442243g0010 No alias 16.7 secondary metabolism.wax encodes a transmembrane... 0.03 Gene family
Smo437448 PACid_15418245 No description available 0.04 Gene family
Solyc03g065250.3.1 Solyc03g065250.3 16.7 secondary metabolism.wax Expression of the CER1... 0.02 Gene family
Solyc07g006300.3.1 Solyc07g006300.3 16.7 secondary metabolism.wax encodes a transmembrane... 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021940 Uncharacterised_Wax2_C 451 613
No external refs found!