Len_g55644


Description : not classified & original description: none


Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g55644

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00158450 PDF1,... Protodermal factor 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G42840 PDF1 protodermal factor 1 0.03 OrthoFinder output from all 47 species
Adi_g007335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010045 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g050187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54373.t1 Aspi01Gene54373 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G093300.1 Ceric.03G093300 not classified & original description: pacid=50573210... 0.03 OrthoFinder output from all 47 species
Ceric.09G029600.1 Ceric.09G029600 not classified & original description: pacid=50588127... 0.03 OrthoFinder output from all 47 species
Ceric.09G030200.1 Ceric.09G030200 not classified & original description: pacid=50586656... 0.02 OrthoFinder output from all 47 species
Ceric.09G030900.1 Ceric.09G030900 not classified & original description: pacid=50587437... 0.02 OrthoFinder output from all 47 species
Ceric.22G043800.1 Ceric.22G043800 not classified & original description: pacid=50614893... 0.04 OrthoFinder output from all 47 species
Dac_g07202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00550 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g08732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g35970.1 LOC_Os06g35970 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g10620.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g22090.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010928 No alias not classified & original description: CDS=1-1425 0.05 OrthoFinder output from all 47 species
Solyc06g083880.2.1 Solyc06g083880 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc07g055950.3.1 PDF1, Solyc07g055950 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g51721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007610_P001 Zm00001e007610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e014410_P001 PDF1, Zm00001e014410 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016528_P003 Zm00001e016528 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030674_P001 Zm00001e030674 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!