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  5. Len_g55554

Len_g55554


Description : not classified & original description: none


Gene families : OG0016483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g55554

Target Alias Description ECC score Gene Family Method Actions
Adi_g003780 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46540 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30412 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 159 207
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 235 260
IPR002885 Pentatricopeptide_repeat 98 118
IPR002885 Pentatricopeptide_repeat 126 156
No external refs found!