AT4G34160 (CYCD3, CYCD3;1)


Aliases : CYCD3, CYCD3;1

Description : CYCLIN D3;1


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0007997 (LandPlants) Phylogenetic Tree(s): OG_02_0007997_tree ,
OG_03_0005800 (SeedPlants) Phylogenetic Tree(s): OG_03_0005800_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34160
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00148150 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 Archaeplastida
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.04 Archaeplastida
GSVIVT01000226001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01000451001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01003610001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
Gb_02122 No alias cyclin (CYCD) 0.02 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.08 Archaeplastida
LOC_Os07g37010.1 No alias cyclin (CYCD) 0.07 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.08 Archaeplastida
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.06 Archaeplastida
MA_103834g0010 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_10436212g0010 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.05 Archaeplastida
MA_93221g0010 No alias cyclin (CYCD) 0.04 Archaeplastida
Smo15078 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
Smo412774 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
Solyc02g092980.3.1 No alias cyclin (CYCD) 0.06 Archaeplastida
Solyc04g078470.3.1 No alias cyclin (CYCD) 0.05 Archaeplastida
Solyc05g006050.3.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Solyc11g010460.3.1 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e003084_P002 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.07 Archaeplastida
Zm00001e018000_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e023829_P003 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.08 Archaeplastida
Zm00001e034029_P002 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e034405_P005 No alias cyclin (CYCD) 0.05 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e035575_P002 No alias cyclin (CYCD) 0.02 Archaeplastida
GSVIVT01000226001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 LandPlants
Solyc02g092980.3.1 No alias cyclin (CYCD) 0.06 LandPlants
Solyc04g078470.3.1 No alias cyclin (CYCD) 0.05 LandPlants
GSVIVT01000226001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 SeedPlants
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 SeedPlants
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 SeedPlants
MA_17738g0010 No alias cyclin (CYCD) 0.01 SeedPlants
Solyc02g092980.3.1 No alias cyclin (CYCD) 0.03 SeedPlants
Solyc04g078470.3.1 No alias cyclin (CYCD) 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IMP Interproscan
BP GO:0000280 nuclear division RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0009735 response to cytokinin IMP Interproscan
BP GO:0009735 response to cytokinin IGI Interproscan
BP GO:0009741 response to brassinosteroid IGI Interproscan
BP GO:0009744 response to sucrose IEP Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0010583 response to cyclopentenone IEP Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Interproscan
BP GO:0042023 DNA endoreduplication RCA Interproscan
BP GO:0042127 regulation of cell population proliferation IGI Interproscan
BP GO:0042127 regulation of cell population proliferation RCA Interproscan
BP GO:0048316 seed development IGI Interproscan
BP GO:0051225 spindle assembly RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 85 186
IPR004367 Cyclin_C-dom 189 285
No external refs found!