AT4G34100


Description : RING/U-box superfamily protein


Gene families : OG_01_0004449 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004449_tree ,
OG_02_0004635 (LandPlants) Phylogenetic Tree(s): OG_02_0004635_tree ,
OG_03_0005839 (SeedPlants) Phylogenetic Tree(s): OG_03_0005839_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34100
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00240580 evm_27.TU.AmTr_v1... Protein degradation.ER-associated protein degradation... 0.05 Archaeplastida
GSVIVT01031710001 No alias Protein degradation.ER-associated protein degradation... 0.03 Archaeplastida
LOC_Os06g43210.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.06 Archaeplastida
MA_15237g0010 No alias ubiquitin ligase component Doa10 of ER-associated... 0.02 Archaeplastida
Pp3c9_10370V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c9_10380V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc01g107880.3.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.05 Archaeplastida
Zm00001e030477_P001 No alias ubiquitin ligase component Doa10 of ER-associated... 0.03 Archaeplastida
Zm00001e037502_P001 No alias ubiquitin ligase component Doa10 of ER-associated... 0.02 Archaeplastida
AMTR_s00035p00240580 evm_27.TU.AmTr_v1... Protein degradation.ER-associated protein degradation... 0.05 LandPlants
GSVIVT01031710001 No alias Protein degradation.ER-associated protein degradation... 0.02 LandPlants
LOC_Os06g43210.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.06 LandPlants
MA_15237g0010 No alias ubiquitin ligase component Doa10 of ER-associated... 0.02 LandPlants
Pp3c9_10370V3.1 No alias RING/U-box superfamily protein 0.02 LandPlants
Solyc01g107880.3.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.05 LandPlants
Zm00001e030477_P001 No alias ubiquitin ligase component Doa10 of ER-associated... 0.03 LandPlants
AMTR_s00035p00240580 evm_27.TU.AmTr_v1... Protein degradation.ER-associated protein degradation... 0.05 SeedPlants
GSVIVT01031710001 No alias Protein degradation.ER-associated protein degradation... 0.02 SeedPlants
LOC_Os06g43210.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.06 SeedPlants
MA_15237g0010 No alias ubiquitin ligase component Doa10 of ER-associated... 0.02 SeedPlants
Solyc01g107880.3.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0008299 isoprenoid biosynthetic process IMP Interproscan
BP GO:0009414 response to water deprivation IGI Interproscan
BP GO:0010025 wax biosynthetic process IMP Interproscan
BP GO:0010143 cutin biosynthetic process IMP Interproscan
BP GO:0010345 suberin biosynthetic process IMP Interproscan
BP GO:1900490 positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 68 114
No external refs found!