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AT4G34040


Description : RING/U-box superfamily protein


Gene families : OG_01_0000125 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000125_tree ,
OG_02_0000151 (LandPlants) Phylogenetic Tree(s): OG_02_0000151_tree ,
OG_03_0000175 (SeedPlants) Phylogenetic Tree(s): OG_03_0000175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34040
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT3G19910 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01022103001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os04g51400.2 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c19_21510V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Solyc07g062720.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 Archaeplastida
Zm00001e000545_P002 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006754_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 Archaeplastida
Zm00001e013125_P002 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
Zm00001e040092_P001 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
AMTR_s00019p00239960 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 LandPlants
AT1G17970 No alias RING/U-box superfamily protein 0.03 LandPlants
GSVIVT01035519001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
LOC_Os04g51400.2 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.04 LandPlants
Pp3c19_21510V3.1 No alias RING/U-box superfamily protein 0.01 LandPlants
Zm00001e006754_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 LandPlants
AMTR_s00019p00239960 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 SeedPlants
GSVIVT01035519001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Zm00001e006754_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 619 660
No external refs found!