Smo230161 (PACid_15411627)


Aliases : PACid_15411627

Description : 20.1.7 stress.biotic.PR-proteins pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression. basic pathogenesis-related protein 1 (PRB1) FUNCTIONS IN: molecular_function unknown INVOLVED IN: response to ethylene stimulus, response to jasmonic acid stimulus, response to salicylic acid stimulus LOCATED IN: endomembrane system, extracellular region EXPRESSED IN: shoot, shoot apex, root, flower, leaf CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044) BEST Arabidopsis thaliana protein match is: pathogenesis-related gene 1 (TAIR:AT2G14610.1) Has 3181 Blast hits to 3075 proteins in 384 species: Archae - 0 Bacteria - 66 Metazoa - 1736 Fungi - 341 Plants - 911 Viruses - 0 Other Eukaryotes - 127 (source: NCBI BLink). & (chl4|518060 : 84.0


Gene families : OG_01_0000046 (Gene family) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo230161
Cluster HCCA cluster: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT4G33710 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Gene family
AT4G33720 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Gene family
GSVIVT01036997001 No alias 20.1.7 stress.biotic.PR-proteins pathogenesis related... 0.03 Gene family
GSVIVT01037005001 No alias 20.1 stress.biotic PR1 gene expression is induced in... 0.03 Gene family
LOC_Os02g27300 Os02g0472500 No description available 0.02 Gene family
LOC_Os02g54570 Os02g0787000 No description available 0.01 Gene family
LOC_Os07g03580 Os07g0127500 No description available 0.02 Gene family
LOC_Os07g03690 Os07g0128800 No description available 0.02 Gene family
LOC_Os07g14030 Os07g0243800 20.1 stress.biotic PR1 gene expression is induced in... 0.01 Gene family
MA_10428480g0010 No alias No description available 0.01 Gene family
MA_501572g0010 No alias No description available 0.02 Gene family
MA_53673g0010 No alias No description available 0.02 Gene family
MA_804456g0010 No alias No description available 0.02 Gene family
Smo233855 PACid_15403301 No description available 0.02 Gene family
Solyc00g174340.2.1 Solyc00g174340.2 20.1.7 stress.biotic.PR-proteins pathogenesis related... 0.02 Gene family
Solyc02g065470.1.1 Solyc02g065470.1 No description available 0.02 Gene family
Zm00001d007448 GRMZM2G367348 No description available 0.02 Gene family
Zm00001d018321 No alias No description available 0.01 Gene family
Zm00001d019364 GRMZM2G053493 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014044 CAP_domain 36 159
No external refs found!