Len_g54705


Description : not classified & original description: none


Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g54705
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00030870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00068p00158450 PDF1,... Protodermal factor 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g007335 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g007336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g050187 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g116822 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g116823 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g00397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g24247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69388.t1 Aspi01Gene69388 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71674.t1 Aspi01Gene71674 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042790 No alias not classified & original description: CDS=188-1138 0.05 OrthoFinder output from all 47 species
Azfi_s0387.g067590 No alias regulatory protein *(MOS11) of helicase activity &... 0.03 OrthoFinder output from all 47 species
Ceric.09G030000.1 Ceric.09G030000 not classified & original description: pacid=50587904... 0.03 OrthoFinder output from all 47 species
Ceric.09G030200.1 Ceric.09G030200 not classified & original description: pacid=50586656... 0.03 OrthoFinder output from all 47 species
Ceric.22G043800.1 Ceric.22G043800 not classified & original description: pacid=50614893... 0.03 OrthoFinder output from all 47 species
Dac_g07202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28301 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g10490.1 LOC_Os01g10490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g13660.1 LOC_Os02g13660 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43670.1 LOC_Os04g43670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g35970.1 LOC_Os06g35970 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_111671g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g10620.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11806 PDF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11807 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010928 No alias not classified & original description: CDS=1-1425 0.03 OrthoFinder output from all 47 species
Solyc07g055950.3.1 PDF1, Solyc07g055950 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g51109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014410_P001 PDF1, Zm00001e014410 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016528_P003 Zm00001e016528 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019923_P004 PDF1, Zm00001e019923 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e030674_P001 Zm00001e030674 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!