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  5. Smo229713

Smo229713 (PACid_15412865)


Aliases : PACid_15412865

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Transmembrane Fragile-X-F-associated protein FUNCTIONS IN: zinc ion binding LOCATED IN: endomembrane system EXPRESSED IN: 24 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396) BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os03g49900.1 : 465.0


Gene families : OG_01_0001626 (Gene family) Phylogenetic Tree(s): OG0001626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo229713
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT1G68820 No alias Transmembrane Fragile-X-F-associated protein 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019396 TM_Fragile-X-F-assoc 77 341
No external refs found!