Smo229713 (PACid_15412865)


Aliases : PACid_15412865

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Transmembrane Fragile-X-F-associated protein FUNCTIONS IN: zinc ion binding LOCATED IN: endomembrane system EXPRESSED IN: 24 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Transmembrane Fragile-X-F-associated protein (InterPro:IPR019396) BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os03g49900.1 : 465.0


Gene families : OG_01_0001626 (Gene family) Phylogenetic Tree(s): OG0001626_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo229713
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT1G68820 No alias Transmembrane Fragile-X-F-associated protein 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019396 TM_Fragile-X-F-assoc 77 341
No external refs found!