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  5. Len_g54674

Len_g54674


Description : not classified & original description: none


Gene families : OG0011811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g54674
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Ala_g14300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G025400.1 OTP84, Ceric.10G025400 not classified & original description: pacid=50611872... 0.03 OrthoFinder output from all 47 species
Dac_g17094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 509 557
IPR002885 Pentatricopeptide_repeat 40 87
IPR002885 Pentatricopeptide_repeat 612 659
IPR002885 Pentatricopeptide_repeat 244 291
IPR002885 Pentatricopeptide_repeat 586 610
IPR002885 Pentatricopeptide_repeat 312 339
IPR002885 Pentatricopeptide_repeat 114 137
IPR002885 Pentatricopeptide_repeat 413 440
IPR002885 Pentatricopeptide_repeat 386 404
No external refs found!