Len_g54503


Description : not classified & original description: none


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g54503

Target Alias Description ECC score Gene Family Method Actions
Aev_g48838 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17703 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05846 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000921001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01009695001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01033051001 No alias No description available 0.05 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10117g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425836g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020268 No alias not classified & original description: CDS=337-2907 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024075 No alias susceptibility factor *(EXA1) & original description: CDS=1-5616 0.03 OrthoFinder output from all 47 species
Solyc04g080240.4.1 Solyc04g080240 susceptibility factor (EXA1) 0.04 OrthoFinder output from all 47 species
Spa_g46291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 589 629
No external refs found!