AT4G33160

Description : F-box family protein

Gene families : OG_01_0008088 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008088_tree ,
OG_02_0007377 (LandPlants) Phylogenetic Tree(s): OG_02_0007377_tree ,
OG_03_0004567 (SeedPlants) Phylogenetic Tree(s): OG_03_0004567_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G33160
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01035605001	No alias	F-box only protein 13 OS=Arabidopsis thaliana	0.03	Archaeplastida
MA_40909g0010	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc08g067300.1.1	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e001925_P002	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os03g28130.1	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.02	LandPlants
LOC_Os07g42590.1	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.02	LandPlants
MA_40909g0010	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.03	LandPlants
Solyc08g067300.1.1	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.02	LandPlants
Zm00001e001925_P002	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.02	LandPlants
MA_40909g0010	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.02	SeedPlants
Zm00001e001925_P002	No alias	F-box only protein 13 OS=Arabidopsis thaliana...	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	65	106

External Links

No external refs found!

AT4G33160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation