AT4G31850 (PGR3)


Aliases : PGR3

Description : proton gradient regulation 3


Gene families : OG_01_0008852 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008852_tree ,
OG_02_0008546 (LandPlants) Phylogenetic Tree(s): OG_02_0008546_tree ,
OG_03_0005697 (SeedPlants) Phylogenetic Tree(s): OG_03_0005697_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G31850
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.15 Archaeplastida
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.08 Archaeplastida
Gb_33624 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 Archaeplastida
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 Archaeplastida
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.13 Archaeplastida
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 Archaeplastida
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.04 LandPlants
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.12 LandPlants
Gb_22719 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 LandPlants
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.06 LandPlants
Gb_33624 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 LandPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 LandPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.14 LandPlants
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 LandPlants
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.12 SeedPlants
Gb_22719 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 SeedPlants
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.06 SeedPlants
Gb_33624 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 SeedPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.12 SeedPlants
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process RCA Interproscan
BP GO:0000272 polysaccharide catabolic process RCA Interproscan
BP GO:0005982 starch metabolic process RCA Interproscan
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
BP GO:0006655 phosphatidylglycerol biosynthetic process RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009664 plant-type cell wall organization RCA Interproscan
BP GO:0009902 chloroplast relocation RCA Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
BP GO:0019252 starch biosynthetic process RCA Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0034660 ncRNA metabolic process RCA Interproscan
BP GO:0046777 protein autophosphorylation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1065 1106
IPR002885 Pentatricopeptide_repeat 994 1039
IPR002885 Pentatricopeptide_repeat 571 620
IPR002885 Pentatricopeptide_repeat 924 972
IPR002885 Pentatricopeptide_repeat 291 338
IPR002885 Pentatricopeptide_repeat 501 538
IPR002885 Pentatricopeptide_repeat 361 409
IPR002885 Pentatricopeptide_repeat 818 867
IPR002885 Pentatricopeptide_repeat 887 917
IPR002885 Pentatricopeptide_repeat 253 284
IPR002885 Pentatricopeptide_repeat 637 670
IPR002885 Pentatricopeptide_repeat 176 235
IPR002885 Pentatricopeptide_repeat 420 473
IPR002885 Pentatricopeptide_repeat 541 568
IPR002885 Pentatricopeptide_repeat 120 147
IPR002885 Pentatricopeptide_repeat 787 816
No external refs found!