Smo18753 (PACid_15402947)


Aliases : PACid_15402947

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein FUNCTIONS IN: zinc ion binding EXPRESSED IN: 22 plant structures EXPRESSED DURING: 15 growth stages CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957) BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G08139.1) Has 7827 Blast hits to 7813 proteins in 270 species: Archae - 0 Bacteria - 9 Metazoa - 2445 Fungi - 565 Plants - 3731 Viruses - 72 Other Eukaryotes - 1005 (source: NCBI BLink). & (loc_os12g02620.1 : 132.0


Gene families : OG_01_0000020 (Gene family) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo18753
Cluster HCCA cluster: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g43740 Os07g0631200 No description available 0.02 Gene family
Solyc02g065650.1.1 Solyc02g065650.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d005630 GRMZM2G037131 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 46 87
No external refs found!