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  5. Len_g51237

Len_g51237


Description : component *(SF3B6) of splicing factor 3B complex & original description: none


Gene families : OG0004199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g51237

Target Alias Description ECC score Gene Family Method Actions
Adi_g017709 No alias component *(SF3B6) of splicing factor 3B complex &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene52318.t1 Aspi01Gene52318 component *(SF3B6) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Cre03.g158950 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 21 87
No external refs found!