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  5. Len_g51078

Len_g51078 (PAL4)


Aliases : PAL4

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g51078

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201930 ATPAL2, PAL2,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
Aev_g15105 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05559.t1 PAL4, Aspi01Gene05559 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20387 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01768 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015138001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01024303001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
GSVIVT01025703001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
Gb_01672 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41630.2 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os04g43760.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os04g43800.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Len_g07383 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429279g0010 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Mp4g14210.1 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Msp_g20938 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19081 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Solyc10g011920.3.1 ATPAL1, PAL1,... Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... 0.03 OrthoFinder output from all 47 species
Solyc10g011930.1.1 ATPAL1, PAL1,... Phenylalanine ammonia-lyase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Spa_g26458 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007572_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Zm00001e015157_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Zm00001e023031_P002 PAL4, Zm00001e023031 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 75 538
No external refs found!