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  5. Len_g50902

Len_g50902 (SPL1)


Aliases : SPL1

Description : SBP-type transcription factor & original description: none


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g50902

Target Alias Description ECC score Gene Family Method Actions
Als_g15978 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29191 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g33491 SPL1 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G052200.1 SPL12, Ceric.10G052200 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g10513 SPL1 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07092 SPL12 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427464g0010 No alias transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Nbi_g02473 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08894 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13310 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019102 SPL1 SBP-type transcription factor & original description: CDS=1-3150 0.02 OrthoFinder output from all 47 species
Sam_g31505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 162 235
No external refs found!