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  5. Len_g50253

Len_g50253


Description : not classified & original description: none


Gene families : OG0000055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g50253
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00241830 HAK5, ATHAK5,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Ala_g25892 KUP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27741 KUP10 potassium cation transporter *(HAK/KUP/KT) & original... 0.04 OrthoFinder output from all 47 species
Ala_g31907 KUP1, ATKT1P,... potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g32180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32685 HAK5, ATHAK5 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g38572 KUP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46837.t1 Aspi01Gene46837 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Cre04.g217350 HAK5, ATHAK5 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Cre17.g714150 HAK5, ATHAK5 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Cre17.g714200 HAK5, ATHAK5 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Cre17.g714450 HAK5, ATHAK5 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Dac_g13405 KUP10 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g25025 HAK5, ATHAK5 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Dde_g01701 ATKT4, KUP3, ATKUP3 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Dde_g44123 HAK5, ATHAK5 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Gb_07512 HAK5, ATHAK5 potassium cation transporter (HAK/KUP/KT) 0.03 OrthoFinder output from all 47 species
Gb_28018 HAK5, ATHAK5 potassium cation transporter (HAK/KUP/KT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g27170.1 ATKT4, KUP3,... potassium cation transporter (HAK/KUP/KT) 0.02 OrthoFinder output from all 47 species
LOC_Os09g27580.1 KUP1, ATKT1P,... potassium cation transporter (HAK/KUP/KT) 0.02 OrthoFinder output from all 47 species
Len_g26513 TRK2, ATKT2,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g09492 No alias potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
MA_90245g0010 HAK5, ATHAK5 potassium cation transporter (HAK/KUP/KT) 0.02 OrthoFinder output from all 47 species
Mp6g19920.1 No alias potassium cation transporter (HAK/KUP/KT) 0.02 OrthoFinder output from all 47 species
Msp_g01225 KUP10 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Pir_g11368 KUP10 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Smo230349 KUP11 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc02g087000.4.1 Solyc02g087000 potassium cation transporter (HAK/KUP/KT) 0.03 OrthoFinder output from all 47 species
Spa_g06082 KUP1, ATKT1P,... potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Tin_g19817 ATKT4, KUP3, ATKUP3 potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035849_P004 TRK2, ATKT2,... potassium cation transporter (HAK/KUP/KT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!