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  5. Len_g50239

Len_g50239 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1

Description : programmed cell death metacaspase-like regulator *(MCP1) & original description: none


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g50239

Target Alias Description ECC score Gene Family Method Actions
AT4G25110 AtMC2, MC2 metacaspase 2 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021122.17 AtMC2, MC2 Multi-process regulation.programmed cell death.MCP1... 0.01 OrthoFinder output from all 47 species
GSVIVT01015724001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.04 OrthoFinder output from all 47 species
LOC_Os03g27120.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Lfl_g02931 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.04 OrthoFinder output from all 47 species
Solyc01g105300.4.1 AtMC3, MC3,... MCP1 programmed cell death metacaspase-like regulator 0.04 OrthoFinder output from all 47 species
Solyc01g105320.4.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e001879_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Zm00001e037976_P001 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Zm00001e037977_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 89 112
No external refs found!