Smo181353 (PACid_15415478)


Aliases : PACid_15415478

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. plant U-box 13 (PUB13) CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024) BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1) Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6 Bacteria - 52 Metazoa - 2498 Fungi - 809 Plants - 4013 Viruses - 3 Other Eukaryotes - 927 (source: NCBI BLink). & (loc_os03g16824.1 : 522.0


Gene families : OG_01_0001127 (Gene family) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo181353
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Solyc11g008390.2.1 Solyc11g008390.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 468 505
No external refs found!