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  5. Smo181353

Smo181353 (PACid_15415478)


Aliases : PACid_15415478

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. plant U-box 13 (PUB13) CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024) BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1) Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6 Bacteria - 52 Metazoa - 2498 Fungi - 809 Plants - 4013 Viruses - 3 Other Eukaryotes - 927 (source: NCBI BLink). & (loc_os03g16824.1 : 522.0


Gene families : OG_01_0001127 (Gene family) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR network (cutoff 100): Smo181353
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Solyc11g008390.2.1 Solyc11g008390.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000225 Armadillo 468 505
No external refs found!