Len_g49598


Description : C2H2 subclass ZFP transcription factor & original description: none


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g49598

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00194700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00212840 ZFP4,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00124p00105750 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.03 OrthoFinder output from all 47 species
Adi_g058301 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g079264 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g18616 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03058.t1 ZFP10, ATZFP10,... C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51187.t1 ZFP6, Aspi01Gene51187 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56786.t1 Aspi01Gene56786 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G009700.1 Ceric.32G009700 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g01554 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g08272 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00797 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g31422 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01016493001 RAB, RBE RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_04808 JGL, NUB no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12546 ZFP1, ATZFP1 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os01g32920.1 LOC_Os01g32920 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os05g20930.1 RAB, RBE, LOC_Os05g20930 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os07g40300.1 ZFP7, LOC_Os07g40300 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Pir_g21934 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g03825 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g060420.2.1 ZFP6, Solyc01g060420 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc05g006310.3.1 ZFP5, Solyc05g006310 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g011120.1.1 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g084910.3.1 TAC1, Solyc10g084910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55681 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013379_P001 ZFP11, ATZFP11,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e032639_P001 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e034883_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!