Smo180368 (PACid_15412552)


Aliases : PACid_15412552

Description : 27.3.54 RNA.regulation of transcription.Histone acetyltransferases Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides. histone acetyltransferase of the CBP family 12 (HAC12) FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation LOCATED IN: nucleus EXPRESSED IN: 23 plant structures EXPRESSED DURING: 12 growth stages CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433) BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1). & (loc_os02g04490.1 : 1135.0


Gene families : OG_01_0002875 (Gene family) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo180368
Cluster HCCA cluster: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G16710 HAC12 histone acetyltransferase of the CBP family 12 0.1 Gene family
AT1G79000 ATHPCAT2, HAC1,... histone acetyltransferase of the CBP family 1 0.07 Gene family
Cre03.g189650 No alias 27.3.54 RNA.regulation of transcription.Histone... 0.01 Gene family
GSVIVT01029442001 No alias 27.3.54 RNA.regulation of transcription.Histone... 0.12 Gene family
LOC_Os01g14370 Os01g0246100 27.3.54 RNA.regulation of transcription.Histone... 0.06 Gene family
LOC_Os02g04490 Os02g0137450,... 27.3.54 RNA.regulation of transcription.Histone... 0.06 Gene family
MA_13363g0010 No alias 27.3.54 RNA.regulation of transcription.Histone... 0.04 Gene family
MA_8978g0010 No alias 27.3.54 RNA.regulation of transcription.Histone... 0.02 Gene family
Solyc01g008120.3.1 Solyc01g008120.3 27.3.54 RNA.regulation of transcription.Histone... 0.04 Gene family
Solyc04g008610.3.1 Solyc04g008610.3 27.3.54 RNA.regulation of transcription.Histone... 0.07 Gene family
Zm00001d015209 GRMZM2G139977 27.3.54 RNA.regulation of transcription.Histone... 0.09 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000197 Znf_TAZ 909 977
No external refs found!