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  5. Len_g49180

Len_g49180 (ATSYP124, SYP124)


Aliases : ATSYP124, SYP124

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g49180

Target Alias Description ECC score Gene Family Method Actions
Als_g02865 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g01106 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Aspi01Gene35684.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Cba_g10610 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Dcu_g51782 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
GSVIVT01035559001 SYP111, ATSYP111, KN Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Gb_39853 ATSYP124, SYP124 Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.04 OrthoFinder output from all 47 species
Len_g59819 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g23596 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Lfl_g40027 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Msp_g11528 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Nbi_g04089 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Pnu_g12258 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016734 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024205 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Solyc06g053760.3.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 OrthoFinder output from all 47 species
Spa_g06782 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 44 132
No external refs found!