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  5. AMTR_s00012p00242760

AMTR_s00012p00242760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.222

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.CDH1-type activator protein


Gene families : OG_01_0000394 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000394_tree ,
OG_02_0001854 (LandPlants) Phylogenetic Tree(s): OG_02_0001854_tree ,
OG_03_0001931 (SeedPlants) Phylogenetic Tree(s): OG_03_0001931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00242760
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT4G33260 CDC20.2 Transducin family protein / WD-40 repeat family protein 0.08 Archaeplastida
AT4G33270 CDC20.1 Transducin family protein / WD-40 repeat family protein 0.11 Archaeplastida
AT5G13840 FZR3 FIZZY-related 3 0.03 Archaeplastida
Cre09.g399911 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 Archaeplastida
Gb_04843 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 Archaeplastida
Gb_41288 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.03 Archaeplastida
LOC_Os01g74146.1 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.14 Archaeplastida
LOC_Os04g51110.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.15 Archaeplastida
MA_10290598g0010 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.14 Archaeplastida
Mp3g00030.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.08 Archaeplastida
Pp3c12_23740V3.1 No alias FIZZY-related 2 0.03 Archaeplastida
Pp3c21_3130V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.03 Archaeplastida
Pp3c21_3140V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.04 Archaeplastida
Pp3c8_6330V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.06 Archaeplastida
Solyc03g096870.3.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.09 Archaeplastida
Solyc06g043150.4.1 No alias Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Solyc06g072830.4.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.17 Archaeplastida
Zm00001e014230_P001 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 Archaeplastida
Zm00001e018501_P001 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.12 Archaeplastida
Zm00001e023310_P002 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.07 Archaeplastida
AT5G13840 FZR3 FIZZY-related 3 0.03 LandPlants
Gb_41288 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.03 LandPlants
LOC_Os01g74146.1 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.12 LandPlants
MA_10290598g0010 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.12 LandPlants
Solyc06g043150.4.1 No alias Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana... 0.08 LandPlants
Zm00001e018501_P001 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.11 LandPlants
AT5G13840 FZR3 FIZZY-related 3 0.03 SeedPlants
Gb_41288 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.03 SeedPlants
LOC_Os01g74146.1 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.12 SeedPlants
MA_10290598g0010 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.12 SeedPlants
Solyc06g043150.4.1 No alias Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana... 0.08 SeedPlants
Zm00001e018501_P001 No alias CDH1-type (APC/C)-dependent ubiquitination activator protein 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 407 442
IPR001680 WD40_repeat 317 357
IPR001680 WD40_repeat 277 312
IPR001680 WD40_repeat 199 229
No external refs found!