AT4G28080


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003177 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003177_tree ,
OG_02_0002275 (LandPlants) Phylogenetic Tree(s): OG_02_0002275_tree ,
OG_03_0002087 (SeedPlants) Phylogenetic Tree(s): OG_03_0002087_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28080
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 Archaeplastida
LOC_Os04g55230.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 Archaeplastida
LOC_Os07g23990.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.08 Archaeplastida
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 Archaeplastida
Pp3c24_6750V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
Pp3c8_14980V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Archaeplastida
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.06 Archaeplastida
Solyc05g050630.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.1 Archaeplastida
Solyc06g068230.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 Archaeplastida
Solyc07g006030.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.13 Archaeplastida
Zm00001e016102_P002 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 Archaeplastida
Zm00001e033372_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.1 Archaeplastida
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.07 LandPlants
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 LandPlants
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.06 LandPlants
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 LandPlants
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 LandPlants
LOC_Os04g55230.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 LandPlants
LOC_Os07g23990.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.08 LandPlants
Pp3c24_6750V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 LandPlants
Pp3c8_14980V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 LandPlants
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.05 LandPlants
Solyc05g050630.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.12 LandPlants
Solyc06g068230.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 LandPlants
Solyc07g006030.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.12 LandPlants
Zm00001e006762_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 LandPlants
Zm00001e016102_P002 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 LandPlants
Zm00001e033372_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.1 LandPlants
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.05 SeedPlants
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 SeedPlants
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.06 SeedPlants
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 SeedPlants
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 SeedPlants
LOC_Os02g15660.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 538.0) 0.07 SeedPlants
LOC_Os04g55230.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 SeedPlants
LOC_Os07g23990.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.08 SeedPlants
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 SeedPlants
Solyc05g050630.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.12 SeedPlants
Solyc06g068230.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 SeedPlants
Solyc07g006030.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.12 SeedPlants
Zm00001e006762_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 SeedPlants
Zm00001e016102_P002 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 SeedPlants
Zm00001e033372_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.1 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006655 phosphatidylglycerol biosynthetic process RCA Interproscan
BP GO:0009737 response to abscisic acid IDA Interproscan
BP GO:0010103 stomatal complex morphogenesis RCA Interproscan
BP GO:0016556 mRNA modification RCA Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033646 CLU-central 724 863
IPR028275 CLU_N 48 118
No external refs found!