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  5. Len_g48602

Len_g48602


Description : not classified & original description: none


Gene families : OG0002786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002786_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g48602
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Aop_g64315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g40457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g43683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g45615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030245 cellulose catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030248 cellulose binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051275 beta-glucan catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!