Smo177791 (PACid_15406521)

Aliases : PACid_15406521

Description : 16.1.5 secondary metabolism.isoprenoids.terpenoids Encodes a protein with solanesyl diphosphate synthase activity. solanesyl diphosphate synthase 1 (SPS1) CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase-related (InterPro:IPR017446), Polyprenyl synthetase (InterPro:IPR000092) BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1) Has 16694 Blast hits to 16671 proteins in 2946 species: Archae - 341 Bacteria - 9481 Metazoa - 459 Fungi - 560 Plants - 421 Viruses - 0 Other Eukaryotes - 5432 (source: NCBI BLink). & (chl4|514236 : 436.0

Gene families : OG_01_0005055 (Gene family) Phylogenetic Tree(s): OG0005055_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Smo177791
Cluster HCCA cluster: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G17050 SPS2 solanesyl diphosphate synthase 2 0.05 Gene family
AT1G78510 SPS1 solanesyl diphosphate synthase 1 0.04 Gene family
Cre13.g565650 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
GSVIVT01014066001 No alias secondary metabolism.isoprenoids.mevalonate... 0.07 Gene family
LOC_Os05g50550 Os05g0582300 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.05 Gene family
LOC_Os12g17320 Os12g0271700 secondary metabolism.isoprenoids.mevalonate... 0.08 Gene family
MA_17853g0010 No alias secondary metabolism.isoprenoids.mevalonate... 0.03 Gene family
Solyc07g061990.3.1 Solyc07g061990.3 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Zm00001d027694 GRMZM2G112728 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
Zm00001d039142 GRMZM2G163809 secondary metabolism.isoprenoids.mevalonate... 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 121 366
No external refs found!