Len_g48112


Description : not classified & original description: none


Gene families : OG0000658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g48112
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AT5G21940 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g059941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015083001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g44900.1 ATOXS3, OXS3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g35630.1 LOC_Os08g35630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g06057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g19370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g066420.4.1 ATOXS3, OXS3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g36515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007143_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e010099_P002 Zm00001e010099 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014432_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015455_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019868_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023244_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027450_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032205_P001 ATOXS3, OXS3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034592_P001 Zm00001e034592 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!