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  5. Len_g47927

Len_g47927 (ATPP2-B11, PP2-B11)


Aliases : ATPP2-B11, PP2-B11

Description : not classified & original description: none


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47927

Target Alias Description ECC score Gene Family Method Actions
AT2G02240 MEE66 F-box family protein 0.02 OrthoFinder output from all 47 species
Dac_g17614 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g13160.1 AtPP2-A12,... F-box protein PP2-A12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g08170.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g23830.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g23505 AtPP2-B1, PP2-B1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13357 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 106 268
No external refs found!