AT4G27310


Description : B-box type zinc finger family protein


Gene families : OG_01_0002023 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002023_tree ,
OG_02_0001425 (LandPlants) Phylogenetic Tree(s): OG_02_0001425_tree ,
OG_03_0001414 (SeedPlants) Phylogenetic Tree(s): OG_03_0001414_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27310
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g07930.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g08120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_6300V3.1 No alias B-box type zinc finger family protein 0.06 Archaeplastida
Pp3c2_30120V3.1 No alias B-box type zinc finger family protein 0.08 Archaeplastida
Pp3c7_25550V3.1 No alias B-box type zinc finger family protein 0.05 Archaeplastida
Solyc02g079430.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g053140.3.1 No alias transcription factor (BBX-CO) 0.1 Archaeplastida
Zm00001e013778_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
GSVIVT01014471001 No alias No description available 0.03 LandPlants
LOC_Os02g07930.1 No alias no hits & (original description: none) 0.06 LandPlants
LOC_Os06g45040.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os08g08120.1 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c11_6300V3.1 No alias B-box type zinc finger family protein 0.06 LandPlants
Pp3c2_30120V3.1 No alias B-box type zinc finger family protein 0.04 LandPlants
Pp3c7_25550V3.1 No alias B-box type zinc finger family protein 0.05 LandPlants
Smo102790 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
Smo49712 No alias No description available 0.02 LandPlants
Solyc02g079430.4.1 No alias no hits & (original description: none) 0.05 LandPlants
Solyc07g053140.3.1 No alias transcription factor (BBX-CO) 0.1 LandPlants
Zm00001e013778_P001 No alias no hits & (original description: none) 0.07 LandPlants
LOC_Os08g08120.1 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc02g079430.4.1 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc07g053140.3.1 No alias transcription factor (BBX-CO) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000315 Znf_B-box 3 44
No external refs found!