Len_g47851 (AtcpRRF, HFP108, cpRRF, RRF)


Aliases : AtcpRRF, HFP108, cpRRF, RRF

Description : translation ribosome recycling factor *(RRF) & original description: none


Gene families : OG0006870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006870_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47851

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00070570 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT3G63190 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.09 OrthoFinder output from all 47 species
Adi_g007469 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Aev_g21988 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Aev_g21989 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Als_g02938 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Aob_g01803 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Aop_g23021 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.08 OrthoFinder output from all 47 species
Cba_g05774 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.09 OrthoFinder output from all 47 species
Ceric.25G011000.1 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.11 OrthoFinder output from all 47 species
Cre03.g156050 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dcu_g01083 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Dde_g00377 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01001148001 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Gb_31542 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g38300.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.09 OrthoFinder output from all 47 species
Lfl_g05872 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Mp5g14000.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.11 OrthoFinder output from all 47 species
Msp_g11460 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g28974 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.07 OrthoFinder output from all 47 species
Ore_g04942 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Pir_g48097 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Pp3c18_6870V3.1 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.02 OrthoFinder output from all 47 species
Ppi_g10744 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006320 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Sam_g15107 No alias translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Solyc09g065270.3.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.06 OrthoFinder output from all 47 species
Spa_g44127 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.12 OrthoFinder output from all 47 species
Tin_g00796 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e021862_P002 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.08 OrthoFinder output from all 47 species
Zm00001e029168_P003 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0051180 vitamin transport IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 115 275
No external refs found!