AT4G26750


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG_01_0004490 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004490_tree ,
OG_02_0005061 (LandPlants) Phylogenetic Tree(s): OG_02_0005061_tree ,
OG_03_0005527 (SeedPlants) Phylogenetic Tree(s): OG_03_0005527_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G26750
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037729001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.06 Archaeplastida
Gb_39689 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
LOC_Os06g20390.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.05 Archaeplastida
MA_2527g0010 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
MA_955549g0010 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
Mp1g06880.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
Solyc07g064980.3.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
Zm00001e031021_P005 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e036912_P001 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
GSVIVT01037729001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 LandPlants
Gb_39689 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 LandPlants
LOC_Os06g20390.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.05 LandPlants
MA_2527g0010 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 LandPlants
MA_955549g0010 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 LandPlants
Mp1g06880.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 LandPlants
Solyc07g064980.3.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 LandPlants
Zm00001e031021_P005 No alias no hits & (original description: none) 0.06 LandPlants
Zm00001e036912_P001 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 LandPlants
GSVIVT01037729001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 SeedPlants
LOC_Os06g20390.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.05 SeedPlants
MA_2527g0010 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 SeedPlants
Solyc07g064980.3.1 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 SeedPlants
Zm00001e031021_P005 No alias no hits & (original description: none) 0.06 SeedPlants
Zm00001e036912_P001 No alias regulatory component VTA1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039431 Vta1/CALS_N 12 148
No external refs found!