Len_g47290


Description : not classified & original description: none


Gene families : OG0003810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003810_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47290

Target Alias Description ECC score Gene Family Method Actions
Adi_g069960 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g077309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30062 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g30314 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g33150 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g34995 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g20889 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g20991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g34950 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g49349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g42132 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g43312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45011 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Len_g47291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51906 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33777 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g36001 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g36417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g37333 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g39804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41099 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g41676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23958 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g36009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33925 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!