Smo174745 (PACid_15420007)


Aliases : PACid_15420007

Description : 16.1.4.8 secondary metabolism.isoprenoids.carotenoids.carotenoid isomerase Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene. carotenoid isomerase (CRTISO) CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Carotene isomerase (InterPro:IPR014101) BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G57770.1) Has 6522 Blast hits to 6439 proteins in 939 species: Archae - 207 Bacteria - 2788 Metazoa - 150 Fungi - 77 Plants - 203 Viruses - 0 Other Eukaryotes - 3097 (source: NCBI BLink). & (q2vex9|crtso_dauca : 781.0


Gene families : OG_01_0005753 (Gene family) Phylogenetic Tree(s): OG0005753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo174745
Cluster HCCA cluster: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cre16.g651923 No alias 16.1.4.8 secondary... 0.02 Gene family
MA_10436461g0010 No alias 16.1.4.8 secondary... 0.02 Gene family
Zm00001d052932 GRMZM2G108457 16.1.4.8 secondary... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002937 Amino_oxidase 77 456
No external refs found!