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  5. Len_g47088

Len_g47088


Description : not classified & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47088

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00077430 AtIDD7, IDD7,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT3G13810 IDD11, AtIDD11 indeterminate(ID)-domain 11 0.04 OrthoFinder output from all 47 species
Als_g60888 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69376.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010283001 IDD5, AtIDD5 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01016867001 AtIDD7, IDD7 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os01g09850.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g10140.1 LOC_Os03g10140 C2H2 zinc finger transcription factor. elicitor peptide... 0.02 OrthoFinder output from all 47 species
LOC_Os08g44050.1 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Ore_g06563 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g17643 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e010319_P001 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e016559_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e020496_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e027791_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034898_P001 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e035365_P003 MGP, Zm00001e035365 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!