Smo174670 (PACid_15419314)


Aliases : PACid_15419314

Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity. RP non-ATPase subunit 8A (RPN8A) FUNCTIONS IN: molecular_function unknown INVOLVED IN: ubiquitin-dependent protein catabolic process, leaf morphogenesis LOCATED IN: proteasome complex, proteasome regulatory particle, lid subcomplex EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555) BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2). & (chl4|514973 : 367.0


Gene families : OG_01_0004685 (Gene family) Phylogenetic Tree(s): OG0004685_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo174670
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.78 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
Cre06.g278256 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
LOC_Os04g56646 Os04g0661900 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
Zm00001d001966 GRMZM2G061745 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Zm00001d026517 GRMZM2G368908,... 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 15 126
No external refs found!