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  5. Len_g46813

Len_g46813 (RPS5B, ATRPS5B)


Aliases : RPS5B, ATRPS5B

Description : component *(uS7) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g46813
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00119380 RPS5B, ATRPS5B,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT2G37270 RPS5B, ATRPS5B ribosomal protein 5B 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021332.10 RPS5B, ATRPS5B Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g10905 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Gb_10560 AML1, RPS5A, ATRPS5A component RPS5 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os11g29190.1 RPS5B, ATRPS5B,... component RPS5 of SSU proteome 0.02 OrthoFinder output from all 47 species
Len_g09112 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Len_g46814 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g27142 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_10428487g0010 RPS5B, ATRPS5B component RPS5 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp3g10570.1 RPS5B, ATRPS5B component RPS5 of SSU proteome 0.03 OrthoFinder output from all 47 species
Sam_g15969 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc10g078620.1.1 AML1, RPS5A,... component RPS5 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e025608_P002 RPS5B, ATRPS5B,... component RPS5 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 55 201
No external refs found!