AT4G25410


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0001232 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001232_tree ,
OG_02_0000765 (LandPlants) Phylogenetic Tree(s): OG_02_0000765_tree ,
OG_03_0000900 (SeedPlants) Phylogenetic Tree(s): OG_03_0000900_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25410
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
AT1G10585 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT1G12540 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT4G25400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G51780 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01018460001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_26737 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g01870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_14352g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_14544g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_290659g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_8008760g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_938775g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc02g078130.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc03g114230.2.1 No alias Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc03g114237.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g035490.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc09g074805.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AT1G10585 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT1G12540 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 LandPlants
AT4G25400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT5G51780 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
GSVIVT01018460001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Gb_26737 No alias transcription factor (bHLH) 0.03 LandPlants
MA_14352g0010 No alias transcription factor (bHLH) 0.03 LandPlants
MA_14544g0010 No alias transcription factor (bHLH) 0.03 LandPlants
MA_290659g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc02g078130.3.1 No alias transcription factor (bHLH) 0.04 LandPlants
Solyc03g114230.2.1 No alias Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.06 LandPlants
Solyc03g114237.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc06g035490.3.1 No alias transcription factor (bHLH) 0.04 LandPlants
AMTR_s00001p00269070 evm_27.TU.AmTr_v1... No description available 0.01 SeedPlants
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
Gb_26737 No alias transcription factor (bHLH) 0.02 SeedPlants
MA_141559g0010 No alias no hits & (original description: none) 0.01 SeedPlants
MA_14352g0010 No alias transcription factor (bHLH) 0.02 SeedPlants
MA_290659g0010 No alias transcription factor (bHLH) 0.02 SeedPlants
MA_331265g0010 No alias transcription factor (bHLH) 0.01 SeedPlants
MA_8008760g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc06g035490.3.1 No alias transcription factor (bHLH) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 44 93
No external refs found!