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  5. Len_g45815

Len_g45815 (SPL7, ATSPL7)


Aliases : SPL7, ATSPL7

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g45815

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Adi_g010861 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021708 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022585 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058412 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31886 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12656.t1 SPL8, Aspi01Gene12656 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25097.t1 SPL2, Aspi01Gene25097 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47643.t1 SPL3, Aspi01Gene47643 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03001 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21516 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09070 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23300 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
LOC_Os06g44860.1 SPL8, LOC_Os06g44860 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g49010.4 SPL2, LOC_Os06g49010 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_10435426g0010 AtSPL9, SPL9 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Ppi_g11404 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18143 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 159 232
No external refs found!