Len_g45740 (NFD03, HMGB3, NFD3)

Aliases : NFD03, HMGB3, NFD3

Description : DNA bending architectural protein *(HMG-B) & original description: none

Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g45740

Target	Alias	Description	ECC score	Gene Family Method
Adi_g045749	ATHMG, HMG, SSRP1, NFD	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g12415	NFD03, HMGB3, NFD3	DNA bending architectural protein *(HMG-B) & original...	0.03	OrthoFinder output from all 47 species
Dac_g20756	NFD2, HMG BETA...	DNA bending architectural protein *(HMG-B) & original...	0.03	OrthoFinder output from all 47 species
Dde_g16545	NFD03, HMGB3, NFD3	DNA bending architectural protein *(HMG-B) & original...	0.04	OrthoFinder output from all 47 species
LOC_Os08g01100.1	HMGB6, LOC_Os08g01100	High mobility group B protein 7 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Ppi_g04305	NFD1, HMGB1	DNA bending architectural protein *(HMG-B) & original...	0.03	OrthoFinder output from all 47 species
Sam_g06141	No alias	DNA bending architectural protein *(HMG-B) & original...	0.03	OrthoFinder output from all 47 species
Solyc02g082700.3.1	NFD2, HMG BETA...	HMG1/2-like protein OS=Ipomoea nil (sp\|p40619\|hmgl_iponi : 82.0)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009071	HMG_box_dom	26	94

External Links

No external refs found!