Len_g45492


Description : not classified & original description: none


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g45492

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00212840 ZFP4,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00139230 RAB, RBE,... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00088p00145510 ZFP5,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00124p00105750 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00067840 ZFP7,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G24625 ZFP7 zinc finger protein 7 0.04 OrthoFinder output from all 47 species
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G09290 TAC1 telomerase activator1 0.02 OrthoFinder output from all 47 species
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.04 OrthoFinder output from all 47 species
Adi_g079264 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g18616 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g11899 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g64420 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03058.t1 ZFP10, ATZFP10,... C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39580.t1 GIS2, Aspi01Gene39580 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene39584.t1 ZFP3, Aspi01Gene39584 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39590.t1 Aspi01Gene39590 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene61235.t1 Aspi01Gene61235 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058099 ZFP7 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.23G038400.1 Ceric.23G038400 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G038300.1 ZFP4, Ceric.29G038300 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G009700.1 Ceric.32G009700 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g07348 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g08272 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g27985 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g38400 GIS2 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g47144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g32920.1 LOC_Os01g32920 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os03g41110.1 ZFP7, LOC_Os03g41110 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
LOC_Os04g50070.1 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os06g10470.1 ZFP8, LOC_Os06g10470 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g01180.1 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g40300.1 ZFP7, LOC_Os07g40300 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g26200.1 ZFP3, LOC_Os09g26200 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g26210.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g27320.1 ZFP8, LOC_Os09g27320 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g38610.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_357706g0010 ZFP10, ATZFP10 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Mp1g25140.1 ZFP11, ATZFP11 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g30209 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g34996 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g45087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13466 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g107430.2.1 ZFP7, Solyc01g107430 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc03g117070.1.1 Solyc03g117070 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc05g009170.3.1 Solyc05g009170 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc10g049870.1.1 ZFP7, Solyc10g049870 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05498 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g29913 ZFP4 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g52372 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000996_P001 ZFP4, Zm00001e000996 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e012453_P001 ZFP1, ATZFP1,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e037946_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!