AT4G25000 (AMY1, ATAMY1)


Aliases : AMY1, ATAMY1

Description : alpha-amylase-like


Gene families : OG_01_0000584 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000584_tree ,
OG_02_0001382 (LandPlants) Phylogenetic Tree(s): OG_02_0001382_tree ,
OG_03_0002339 (SeedPlants) Phylogenetic Tree(s): OG_03_0002339_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25000
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00183740 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.04 Archaeplastida
AMTR_s00010p00102390 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 Archaeplastida
LOC_Os02g52710.1 No alias alpha amylase 0.02 Archaeplastida
LOC_Os06g49970.2 No alias alpha amylase 0.03 Archaeplastida
LOC_Os09g28420.1 No alias alpha amylase 0.03 Archaeplastida
MA_217935g0010 No alias alpha amylase 0.02 Archaeplastida
MA_30833g0020 No alias alpha amylase 0.02 Archaeplastida
MA_336273g0010 No alias alpha amylase 0.02 Archaeplastida
MA_8527195g0010 No alias Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g24810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g095710.4.1 No alias alpha amylase 0.06 Archaeplastida
AMTR_s00010p00102390 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 LandPlants
LOC_Os02g52710.1 No alias alpha amylase 0.02 LandPlants
LOC_Os06g49970.2 No alias alpha amylase 0.02 LandPlants
MA_30833g0020 No alias alpha amylase 0.02 LandPlants
MA_336273g0010 No alias alpha amylase 0.02 LandPlants
Smo97625 No alias Carbohydrate metabolism.starch... 0.02 LandPlants
Solyc03g095710.4.1 No alias alpha amylase 0.04 LandPlants
Zm00001e009946_P001 No alias alpha amylase 0.02 LandPlants
Zm00001e015947_P002 No alias alpha amylase 0.02 LandPlants
Zm00001e034027_P001 No alias no hits & (original description: none) 0.02 LandPlants
AMTR_s00010p00102390 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 SeedPlants
LOC_Os06g49970.2 No alias alpha amylase 0.02 SeedPlants
MA_30833g0020 No alias alpha amylase 0.02 SeedPlants
Solyc03g095710.4.1 No alias alpha amylase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IMP Interproscan
MF GO:0004556 alpha-amylase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005576 extracellular region TAS Interproscan
BP GO:0009737 response to abscisic acid IEP Interproscan
BP GO:0009739 response to gibberellin IEP Interproscan
CC GO:0048046 apoplast IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 363 421
IPR006047 Glyco_hydro_13_cat_dom 50 342
No external refs found!